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mad2l1 MAD2 mitotic arrest deficient-like 1 (yeast) [ Ictalurus punctatus (channel catfish) ]

Gene ID: 100528709, updated on 20-Aug-2024

Summary

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Gene symbol
mad2l1
Gene description
MAD2 mitotic arrest deficient-like 1 (yeast)
See related
EnsemblRapid:ENSIPUG00020032965
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
md2l1
Orthologs
human zebrafish all
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Genomic context

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See mad2l1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 7 NC_030422.2 (13247240..13252082)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 7 NC_030422.1 (11418434..11423276)

Chromosome 7 - NC_030422.2Genomic Context describing neighboring genes Neighboring gene ankyrin 2b, neuronal Neighboring gene calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 Neighboring gene arylsulfatase family, member J Neighboring gene phosphodiesterase 5A, cGMP-specific, b Neighboring gene uncharacterized LOC108267189

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article
  2. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitotic spindle assembly checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitotic spindle assembly checkpoint protein MAD2A
Names
mitotic arrest deficient 2 like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001200979.1 → NP_001187908.1  mitotic spindle assembly checkpoint protein MAD2A

    See identical proteins and their annotated locations for NP_001187908.1

    Status: PROVISIONAL

    Source sequence(s)
    GU589335
    UniProtKB/TrEMBL
    E3TG49
    Related
    ENSIPUP00020059955.1, ENSIPUT00020079341.1
    Conserved Domains (1) summary
    pfam02301
    Location:10 → 188
    HORMA; HORMA domain

RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030422.2 Reference Coco_2.0 Primary Assembly

    Range
    13247240..13252082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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