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NALF2 NALCN channel auxiliary factor 2 [ Sus scrofa (pig) ]

Gene ID: 100518049, updated on 8-Mar-2024

Summary

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Official Symbol
NALF2provided by VGNC
Official Full Name
NALCN channel auxiliary factor 2provided by VGNC
Primary source
VGNC:VGNC:87911
See related
Ensembl:ENSSSCG00000012386
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
FAM155B
Expression
Broad expression in lung (RPKM 12.2), spleen (RPKM 7.8) and 5 other tissues See more
Orthologs
human mouse all
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Genomic context

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See NALF2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) X NC_010461.5 (55631149..55658309)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) X NC_010461.4 (62829412..62856570)

Chromosome X - NC_010461.5Genomic Context describing neighboring genes Neighboring gene praja ring finger ubiquitin ligase 1 Neighboring gene small nuclear ribonucleoprotein E pseudogene Neighboring gene ectodysplasin A Neighboring gene microRNA mir-676-1 Neighboring gene acyl-CoA wax alcohol acyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables stretch-activated, monoatomic cation-selective, calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein FAM155B
Names
family with sequence similarity 155 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010461.5 Reference Sscrofa11.1 Primary Assembly

    Range
    55631149..55658309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021080042.1 → XP_020935701.1  transmembrane protein FAM155B isoform X1

  2. XM_003135158.4 → XP_003135206.1  transmembrane protein FAM155B isoform X2

    UniProtKB/TrEMBL
    A0A8D1ZTW6, F1RSX6
    Related
    ENSSSCP00000013182.2, ENSSSCT00000013544.6
Nucleotide Protein
Heading Accession and Version

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