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bsk146 brain specific kinase 146 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100495913, updated on 25-Apr-2024

Summary

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Official Symbol
bsk146provided by Xenbase
Official Full Name
brain specific kinase 146provided by Xenbase
Primary source
Xenbase:XB-GENE-5880592
See related
Ensembl:ENSXETG00000012254
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See bsk146 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (46021696..46032740)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (37442126..37453434)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene T-cell antigen CD7-like Neighboring gene dehydrogenase/reductase (SDR family) member 7C Neighboring gene ATP binding cassette subfamily C member 3 Neighboring gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine-protein kinase SBK1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    46021696..46032740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935919.5 → XP_002935965.1  serine/threonine-protein kinase SBK1

    UniProtKB/TrEMBL
    F6VK53
    Related
    ENSXETP00000109239.1, ENSXETT00000108933.1
    Conserved Domains (1) summary
    cd13987
    Location:41 → 299
    STKc_SBK1; Catalytic domain of the Serine/Threonine kinase, SH3 Binding Kinase 1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials