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UCHL3 ubiquitin C-terminal hydrolase L3 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100479695, updated on 8-Mar-2024

Summary

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Gene symbol
UCHL3
Gene description
ubiquitin C-terminal hydrolase L3
Locus tag
PANDA_016612
See related
Ensembl:ENSAMEG00000011396
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 7 NC_048224.1 (109877889..109921929)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218466.1 (304024..347712)

Chromosome 7 - NC_048224.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 4 Neighboring gene small nucleolar RNA U3 Neighboring gene COMM domain containing 6 Neighboring gene LIM domain 7 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase isozyme L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048224.1 Reference ASM200744v2 Primary Assembly

    Range
    109877889..109921929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034665312.1 → XP_034521203.1  ubiquitin carboxyl-terminal hydrolase isozyme L3 isoform X1

    UniProtKB/TrEMBL
    G1LY57

  2. XM_034665315.1 → XP_034521206.1  ubiquitin carboxyl-terminal hydrolase isozyme L3 isoform X4

    UniProtKB/TrEMBL
    D2HW05

  3. XM_011234332.3 → XP_011232634.1  ubiquitin carboxyl-terminal hydrolase isozyme L3 isoform X2

    See identical proteins and their annotated locations for XP_011232634.1

    UniProtKB/TrEMBL
    A0A7N5KM99, G1LY57
    Related
    ENSAMEP00000041977.1, ENSAMET00000029306.1
    Conserved Domains (1) summary
    cd09616
    Location:6 → 291
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3

  4. XM_034665314.1 → XP_034521205.1  ubiquitin carboxyl-terminal hydrolase isozyme L3 isoform X3

  5. XM_002926844.4 → XP_002926890.1  ubiquitin carboxyl-terminal hydrolase isozyme L3 isoform X5

    See identical proteins and their annotated locations for XP_002926890.1

    UniProtKB/TrEMBL
    G1LY51
    Related
    ENSAMEP00000012007.1, ENSAMET00000012514.2
    Conserved Domains (1) summary
    cd09616
    Location:6 → 227
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3
Nucleotide Protein
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