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TNFSF15 TNF superfamily member 15 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100473862, updated on 8-Mar-2024

Summary

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Gene symbol
TNFSF15
Gene description
TNF superfamily member 15
Locus tag
PANDA_003835
See related
Ensembl:ENSAMEG00000012454
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 7 NC_048224.1 (41799532..41827569, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217393.1 (1363814..1379866)

Chromosome 7 - NC_048224.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V1 subunit G1 Neighboring gene transmembrane protein 268 Neighboring gene uncharacterized LOC117803012 Neighboring gene uncharacterized LOC117803011 Neighboring gene TNF superfamily member 8 Neighboring gene uncharacterized LOC105236048

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor ligand superfamily member 15
Names
tumor necrosis factor superfamily member 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048224.1 Reference ASM200744v2 Primary Assembly

    Range
    41799532..41827569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034664387.1 → XP_034520278.1  tumor necrosis factor ligand superfamily member 15 isoform X2

  2. XM_002915773.4 → XP_002915819.1  tumor necrosis factor ligand superfamily member 15 isoform X1

    See identical proteins and their annotated locations for XP_002915819.1

    UniProtKB/TrEMBL
    D2H2H8, G1M192
    Related
    ENSAMEP00000013103.2, ENSAMET00000013652.2
    Conserved Domains (1) summary
    pfam00229
    Location:121 → 255
    TNF; TNF(Tumour Necrosis Factor) family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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