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LOC100473665 ETS variant transcription factor 3 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100473665, updated on 16-Nov-2023

Summary

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Gene symbol
LOC100473665
Gene description
ETS variant transcription factor 3
Locus tag
PANDA_020100
See related
Ensembl:ENSAMEG00000014816
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Also known as
ETV3
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Genomic context

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Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 8 NC_048225.1 (126871217..126884983)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219278.1 (195673..209176, complement)

Chromosome 8 - NC_048225.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117803496 Neighboring gene SLAM family member 9-like Neighboring gene uncharacterized LOC117803494 Neighboring gene SLAM family member 8-like Neighboring gene ETS variant transcription factor 3 like Neighboring gene Rho guanine nucleotide exchange factor 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS translocation variant 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048225.1 Reference ASM200744v2 Primary Assembly

    Range
    126871217..126884983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034667395.1 → XP_034523286.1  ETS translocation variant 3 isoform X1

    UniProtKB/TrEMBL
    G1M8D1

  2. XM_034667398.1 → XP_034523289.1  ETS translocation variant 3 isoform X2

    UniProtKB/TrEMBL
    A0A7N5J9X0

  3. XM_034667399.1 → XP_034523290.1  ETS translocation variant 3 isoform X3

    UniProtKB/TrEMBL
    A0A7N5J9X0

  4. XM_034667396.1 → XP_034523287.1  ETS translocation variant 3 isoform X1

    UniProtKB/TrEMBL
    G1M8D1
    Related
    ENSAMEP00000015601.2, ENSAMET00000016251.2
Nucleotide Protein
Heading Accession and Version

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