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CFAP52 cilia and flagella associated protein 52 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100472266, updated on 8-Mar-2024

Summary

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Gene symbol
CFAP52
Gene description
cilia and flagella associated protein 52
Locus tag
PANDA_010044
See related
Ensembl:ENSAMEG00000001999
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Also known as
WDR16
Orthologs
human mouse all
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Genomic context

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See CFAP52 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 17 NC_048234.1 (3893328..3933225)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217758.1 (70409..109639, complement)

Chromosome 17 - NC_048234.1Genomic Context describing neighboring genes Neighboring gene netrin 1 Neighboring gene syntaxin 8 Neighboring gene U2 spliceosomal RNA Neighboring gene ubiquitin specific peptidase 43 Neighboring gene uncharacterized LOC109489926

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 52
Names
WD repeat domain 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048234.1 Reference ASM200744v2 Primary Assembly

    Range
    3893328..3933225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002921142.4 → XP_002921188.1  cilia- and flagella-associated protein 52

    UniProtKB/TrEMBL
    D2HGE2, G1L5I1
    Related
    ENSAMEP00000002142.1, ENSAMET00000002233.2
    Conserved Domains (3) summary
    COG2319
    Location:277 → 620
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:420 → 459
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:346 → 615
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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