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MTM1 myotubularin 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100470283, updated on 8-Mar-2024

Summary

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Gene symbol
MTM1
Gene description
myotubularin 1
Locus tag
PANDA_017326
See related
Ensembl:ENSAMEG00000017035
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See MTM1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (108693989..108788887)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218112.1 (886232..917730, complement)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene endothelium and lymphocyte associated ASCH domain 1 Neighboring gene mastermind like domain containing 1 Neighboring gene uncharacterized LOC117797372 Neighboring gene U6 spliceosomal RNA Neighboring gene myotubularin related protein 1 Neighboring gene CD99 molecule like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    108693989..108788887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034648811.1 → XP_034504702.1  myotubularin isoform X1

  2. XM_034648812.1 → XP_034504703.1  myotubularin isoform X2

  3. XM_034648813.1 → XP_034504704.1  myotubularin isoform X3

    UniProtKB/TrEMBL
    G1MF75
    Related
    ENSAMEP00000018004.2, ENSAMET00000018735.2

  4. XM_034648814.1 → XP_034504705.1  myotubularin isoform X4

  5. XM_034648815.1 → XP_034504706.1  myotubularin isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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