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NEUROD1 neuronal differentiation 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100464424, updated on 8-Mar-2024

Summary

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Gene symbol
NEUROD1
Gene description
neuronal differentiation 1
Locus tag
PANDA_011282
See related
Ensembl:ENSAMEG00000019191
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See NEUROD1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 2 NC_048219.1 (149003678..149007802, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217851.1 (614830..617801)

Chromosome 2 - NC_048219.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117801107 Neighboring gene integrin subunit alpha 4 Neighboring gene ceramide kinase like Neighboring gene uncharacterized LOC109490086 Neighboring gene uncharacterized LOC117801109 Neighboring gene uncharacterized LOC117801108

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurogenic differentiation factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048219.1 Reference ASM200744v2 Primary Assembly

    Range
    149003678..149007802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002922273.3 → XP_002922319.1  neurogenic differentiation factor 1

    See identical proteins and their annotated locations for XP_002922319.1

    UniProtKB/TrEMBL
    D2HJ32
    Related
    ENSAMEP00000020259.1, ENSAMET00000021028.2
    Conserved Domains (2) summary
    cd00083
    Location:100 → 158
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    pfam12533
    Location:160 → 284
    Neuro_bHLH; Neuronal helix-loop-helix transcription factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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