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DDX53 DEAD-box helicase 53 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100456699, updated on 26-Mar-2024

Summary

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Gene symbol
DDX53
Gene description
DEAD-box helicase 53
Locus tag
CR201_G0013199
See related
Ensembl:ENSPPYG00000020185
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human all
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Genomic context

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See DDX53 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) X NC_072008.2 (23120942..23123239)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) X NC_072008.1 (23120941..23123238)

Chromosome X - NC_072008.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene protein Hikeshi-like Neighboring gene patched domain containing 1 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEAD box protein 53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072008.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    23120942..23123239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002831454.5 → XP_002831500.2  DEAD box protein 53

    UniProtKB/TrEMBL
    A0A2J8W403, H2PV43
    Related
    ENSPPYP00000022587.2
    Conserved Domains (2) summary
    pfam00013
    Location:53 → 100
    KH_1; KH domain
    cl26939
    Location:170 → 611
    DEXDc; DEAD-like helicases superfamily
Nucleotide Protein
Heading Accession and Version

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