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VPS33B VPS33B late endosome and lysosome associated [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100454748, updated on 26-Mar-2024

Summary

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Gene symbol
VPS33B
Gene description
VPS33B late endosome and lysosome associated
Locus tag
CR201_G0014817
See related
Ensembl:ENSPPYG00000006792
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See VPS33B in Genome Data Viewer
Location:
chromosome: 16
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 16 NC_072001.2 (94103257..94127013, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 15 NC_072000.1 (91469700..91493712, complement)

Chromosome 16 - NC_072001.2Genomic Context describing neighboring genes Neighboring gene RCC1 domain containing 1 Neighboring gene protein regulator of cytokinesis 1 Neighboring gene uncharacterized LOC129050198 Neighboring gene uncharacterized LOC112129094 Neighboring gene golgin subfamily A member 2-like Neighboring gene ubiquitin-ribosomal protein eS31 fusion protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CORVET complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 33B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072001.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    94103257..94127013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009250172.4 → XP_009248447.2  vacuolar protein sorting-associated protein 33B isoform X1

    UniProtKB/TrEMBL
    A0A2J8VXI0, A0A2J8VXL6, A0A663D577, A0A8I5YKZ1, H2NP83
    Related
    ENSPPYP00000007705.2
    Conserved Domains (1) summary
    pfam00995
    Location:37 → 605
    Sec1; Sec1 family

  2. XM_024232780.3 → XP_024088548.1  vacuolar protein sorting-associated protein 33B isoform X2

    UniProtKB/TrEMBL
    A0A2J8VXL6, A0A8I5YKZ1
    Conserved Domains (1) summary
    pfam00995
    Location:12 → 514
    Sec1; Sec1 family
Nucleotide Protein
Heading Accession and Version

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