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KCNT2 potassium sodium-activated channel subfamily T member 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100453497, updated on 3-Apr-2024

Summary

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Gene symbol
KCNT2
Gene description
potassium sodium-activated channel subfamily T member 2
Locus tag
CR201_G0024214
See related
Ensembl:ENSPPYG00000000393
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See KCNT2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (52972494..53366314)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (52972470..53366279)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene complement factor H-related protein 4 Neighboring gene complement factor H-related protein 3 Neighboring gene complement factor H Neighboring gene uncharacterized LOC112133132 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables intracellular sodium-activated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables outward rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium channel subfamily T member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    52972494..53366314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054523897.2 → XP_054379872.1  potassium channel subfamily T member 2 isoform X1

  2. XM_054523917.2 → XP_054379892.1  potassium channel subfamily T member 2 isoform X5

    UniProtKB/TrEMBL
    A0A2J8UXZ6, H2N4B4

  3. XM_024239215.3 → XP_024094983.1  potassium channel subfamily T member 2 isoform X9

    UniProtKB/TrEMBL
    A0A2J8UXZ3, A0A8I5TW74
    Conserved Domains (3) summary
    pfam00520
    Location:63 → 270
    Ion_trans; Ion transport protein
    pfam03493
    Location:431 → 526
    BK_channel_a; Calcium-activated BK potassium channel alpha subunit
    pfam07885
    Location:226 → 272
    Ion_trans_2; Ion channel

  4. XM_054523904.1 → XP_054379879.1  potassium channel subfamily T member 2 isoform X2

  5. XM_054523951.1 → XP_054379926.1  potassium channel subfamily T member 2 isoform X10

  6. XM_054523909.2 → XP_054379884.1  potassium channel subfamily T member 2 isoform X3

  7. XM_054523922.2 → XP_054379897.1  potassium channel subfamily T member 2 isoform X6

  8. XM_054523931.2 → XP_054379906.1  potassium channel subfamily T member 2 isoform X8

  9. XM_054523915.2 → XP_054379890.1  potassium channel subfamily T member 2 isoform X4

  10. XM_063726095.1 → XP_063582165.1  potassium channel subfamily T member 2 isoform X7

  11. XM_054523959.2 → XP_054379934.1  potassium channel subfamily T member 2 isoform X11

RNA

  1. XR_008510934.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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