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LOC100451910 polycystin-1-like protein 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100451910, updated on 26-Mar-2024

Summary

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Gene symbol
LOC100451910
Gene description
polycystin-1-like protein 2
Locus tag
CR201_G0015501
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
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Genomic context

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Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 18 NC_072003.2 (80541161..80578422, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 16 NC_072001.1 (79954335..79991596, complement)

Chromosome 18 - NC_072003.2Genomic Context describing neighboring genes Neighboring gene chromosome 18 C16orf46 homolog Neighboring gene glycine cleavage system protein H Neighboring gene U6 spliceosomal RNA Neighboring gene polycystin-1-like protein 2 Neighboring gene beta-carotene oxygenase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystin-1-like protein 2
Names
polycystic kidney disease protein 1-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072003.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    80541161..80578422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054534424.1 → XP_054390399.1  polycystin-1-like protein 2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials