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MTMR1 myotubularin related protein 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100443993, updated on 3-Apr-2024

Summary

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Gene symbol
MTMR1
Gene description
myotubularin related protein 1
Locus tag
CR201_G0046448
See related
Ensembl:ENSPPYG00000020816
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See MTMR1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) X NC_072008.2 (157153090..157226650)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) X NC_072008.1 (157153110..157226668)

Chromosome X - NC_072008.2Genomic Context describing neighboring genes Neighboring gene mastermind like domain containing 1 Neighboring gene myotubularin 1 Neighboring gene CD99 molecule like 2 Neighboring gene small nucleolar RNA U3 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072008.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    157153090..157226650
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009235368.4 → XP_009233643.1  myotubularin-related protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8S3V7, A0A2J8S404, A0A8I5TFN2
    Related
    ENSPPYP00000031842.1
    Conserved Domains (2) summary
    cd13358
    Location:118 → 217
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:240 → 560
    Myotub-related; Myotubularin-like phosphatase domain

  2. XM_054545196.2 → XP_054401171.1  myotubularin-related protein 1 isoform X1

  3. XM_009235369.4 → XP_009233644.1  myotubularin-related protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8S3V7, A0A2J8S3W1, H2PX24
    Related
    ENSPPYP00000023300.3
    Conserved Domains (2) summary
    cd13358
    Location:110 → 209
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:232 → 552
    Myotub-related; Myotubularin-like phosphatase domain
Nucleotide Protein
Heading Accession and Version

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