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BBS4 Bardet-Biedl syndrome 4 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100443076, updated on 3-Apr-2024

Summary

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Gene symbol
BBS4
Gene description
Bardet-Biedl syndrome 4
Locus tag
CR201_G0028753
See related
Ensembl:ENSPPYG00000006620
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See BBS4 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 16 NC_072001.2 (75914036..75966186)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 15 NC_072000.1 (73185573..73238052)

Chromosome 16 - NC_072001.2Genomic Context describing neighboring genes Neighboring gene golgin subfamily A member 6C Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene HIG1 hypoxia inducible domain family member 2B Neighboring gene ADP dependent glucokinase Neighboring gene uncharacterized LOC129050155

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bardet-Biedl syndrome 4 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072001.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    75914036..75966186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024232712.3 → XP_024088480.3  Bardet-Biedl syndrome 4 protein isoform X2

    UniProtKB/TrEMBL
    A0A2J8UCS9, H2NNP4

  2. XM_054531639.2 → XP_054387614.2  Bardet-Biedl syndrome 4 protein isoform X4

  3. XM_024232711.3 → XP_024088479.3  Bardet-Biedl syndrome 4 protein isoform X1

  4. XM_054531641.2 → XP_054387616.2  Bardet-Biedl syndrome 4 protein isoform X5

    UniProtKB/TrEMBL
    A0A2J8UCV7

  5. XM_054531638.2 → XP_054387613.2  Bardet-Biedl syndrome 4 protein isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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