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PLD1 phospholipase D1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100439813, updated on 26-Mar-2024

Summary

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Gene symbol
PLD1
Gene description
phospholipase D1
Locus tag
CR201_G0034728
See related
Ensembl:ENSPPYG00000014298
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See PLD1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (181528619..181738644, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (169324047..169528039, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene TRAF2 and NCK interacting kinase Neighboring gene uncharacterized LOC134761054 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC103890303 Neighboring gene transmembrane protein 212

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microvillus assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    181528619..181738644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002814286.6 → XP_002814332.3  phospholipase D1 isoform X2

  2. XM_002814285.6 → XP_002814331.3  phospholipase D1 isoform X1

  3. XM_054552993.2 → XP_054408968.2  phospholipase D1 isoform X1

  4. XM_054552994.2 → XP_054408969.2  phospholipase D1 isoform X1

  5. XM_009239541.4 → XP_009237816.3  phospholipase D1 isoform X1

  6. XM_054552992.2 → XP_054408967.2  phospholipase D1 isoform X1

  7. XM_054552995.2 → XP_054408970.2  phospholipase D1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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