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PAFAH1B3 platelet activating factor acetylhydrolase 1b catalytic subunit 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100414854, updated on 8-Mar-2024

Summary

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Gene symbol
PAFAH1B3
Gene description
platelet activating factor acetylhydrolase 1b catalytic subunit 3
See related
Ensembl:ENSCJAG00000012900
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PAFAH1B3 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 22 NC_071463.1 (35914609..35920652, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 22 NC_048404.1 (37237588..37243633, complement)

Chromosome 22 - NC_071463.1Genomic Context describing neighboring genes Neighboring gene ETS2 repressor factor Neighboring gene capicua transcriptional repressor Neighboring gene proline rich 19 Neighboring gene transmembrane protein 145

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
platelet-activating factor acetylhydrolase IB subunit alpha1
Names
platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071463.1 Reference mCalJa1.2.pat.X

    Range
    35914609..35920652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002762194.4 → XP_002762240.1  platelet-activating factor acetylhydrolase IB subunit alpha1

    See identical proteins and their annotated locations for XP_002762240.1

    UniProtKB/TrEMBL
    F7H805
    Conserved Domains (1) summary
    cd01820
    Location:7 → 205
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

  2. XM_008988111.4 → XP_008986359.1  platelet-activating factor acetylhydrolase IB subunit alpha1

    See identical proteins and their annotated locations for XP_008986359.1

    UniProtKB/TrEMBL
    F7H805
    Conserved Domains (1) summary
    cd01820
    Location:7 → 205
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...

  3. XM_008988112.3 → XP_008986360.1  platelet-activating factor acetylhydrolase IB subunit alpha1

    See identical proteins and their annotated locations for XP_008986360.1

    UniProtKB/TrEMBL
    F7H805
    Related
    ENSCJAP00000023654.2
    Conserved Domains (1) summary
    cd01820
    Location:7 → 205
    PAF_acetylesterase_like; PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate ...
Nucleotide Protein
Heading Accession and Version

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