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SLC25A15 solute carrier family 25 member 15 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100413681, updated on 8-Mar-2024

Summary

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Gene symbol
SLC25A15
Gene description
solute carrier family 25 member 15
See related
Ensembl:ENSCJAG00000017797
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See SLC25A15 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (156014186..156037563)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (158744073..158767448)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S31 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC103793523 Neighboring gene phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 Neighboring gene M-phase-specific PLK1-interacting protein-like Neighboring gene cytochrome c-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial ornithine transporter 1
Names
solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    156014186..156037563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035302550.2 → XP_035158441.1  mitochondrial ornithine transporter 1 isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:207 → 296
    Mito_carr; Mitochondrial carrier protein

  2. XM_035302546.2 → XP_035158437.1  mitochondrial ornithine transporter 1 isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:253 → 342
    Mito_carr; Mitochondrial carrier protein

  3. XM_008998170.4 → XP_008996418.1  mitochondrial ornithine transporter 1 isoform X4

    See identical proteins and their annotated locations for XP_008996418.1

    UniProtKB/TrEMBL
    U3CT12
    Related
    ENSCJAP00000032834.2
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 295
    Mito_carr; Mitochondrial carrier protein

  4. XM_017973060.3 → XP_017828549.1  mitochondrial ornithine transporter 1 isoform X5

  5. XM_035302547.2 → XP_035158438.1  mitochondrial ornithine transporter 1 isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:253 → 342
    Mito_carr; Mitochondrial carrier protein

  6. XM_054256818.1 → XP_054112793.1  mitochondrial ornithine transporter 1 isoform X2

  7. XM_035302549.2 → XP_035158440.1  mitochondrial ornithine transporter 1 isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:221 → 310
    Mito_carr; Mitochondrial carrier protein

  8. XM_035302548.2 → XP_035158439.1  mitochondrial ornithine transporter 1 isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:221 → 310
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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