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HEATR3 HEAT repeat containing 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100413528, updated on 8-Mar-2024

Summary

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Gene symbol
HEATR3
Gene description
HEAT repeat containing 3
See related
Ensembl:ENSCJAG00000001972
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 20 NC_071461.1 (4523401..4565910)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 20 NC_048402.1 (5506229..5547970)

Chromosome 20 - NC_071461.1Genomic Context describing neighboring genes Neighboring gene regulation of nuclear pre-mRNA domain-containing protein 1A-like Neighboring gene actin, cytoplasmic type 8-like Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene small nucleolar RNA SNORA70 Neighboring gene terminal nucleotidyltransferase 4B Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HEAT repeat-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071461.1 Reference mCalJa1.2.pat.X

    Range
    4523401..4565910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008985843.4 → XP_008984091.1  HEAT repeat-containing protein 3 isoform X1

    See identical proteins and their annotated locations for XP_008984091.1

    UniProtKB/TrEMBL
    U3B847, U3EF64
    Related
    ENSCJAP00000003595.1
    Conserved Domains (3) summary
    cd13394
    Location:2 → 673
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:69 → 108
    ARM; armadillo repeat [structural motif]
    cl17037
    Location:272 → 358
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

  2. XM_017967005.3 → XP_017822494.1  HEAT repeat-containing protein 3 isoform X4

  3. XM_017967002.3 → XP_017822491.1  HEAT repeat-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    U3EF64

  4. XM_054248739.1 → XP_054104714.1  HEAT repeat-containing protein 3 isoform X5

  5. XM_054248738.1 → XP_054104713.1  HEAT repeat-containing protein 3 isoform X3

  6. XM_054248740.1 → XP_054104715.1  HEAT repeat-containing protein 3 isoform X5

Nucleotide Protein
Heading Accession and Version

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