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KCNIP4 potassium voltage-gated channel interacting protein 4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100411973, updated on 8-Mar-2024

Summary

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Gene symbol
KCNIP4
Gene description
potassium voltage-gated channel interacting protein 4
See related
Ensembl:ENSCJAG00000012939
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See KCNIP4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 3 NC_071444.1 (168768306..169320236)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 3 NC_048385.1 (170664347..171867121)

Chromosome 3 - NC_071444.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L18-like Neighboring gene uncharacterized LOC118152403 Neighboring gene uncharacterized LOC128931668 Neighboring gene uncharacterized LOC118152404 Neighboring gene parkin coregulated like Neighboring gene slit guidance ligand 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Kv channel-interacting protein 4
Names
Kv channel interacting protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071444.1 Reference mCalJa1.2.pat.X

    Range
    168768306..169320236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002745949.5 → XP_002745995.1  Kv channel-interacting protein 4 isoform X2

    See identical proteins and their annotated locations for XP_002745995.1

    UniProtKB/TrEMBL
    U3F074
    Conserved Domains (1) summary
    COG5126
    Location:59 → 218
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_054253640.1 → XP_054109615.1  Kv channel-interacting protein 4 isoform X4

  3. XM_054253642.1 → XP_054109617.1  Kv channel-interacting protein 4 isoform X5

  4. XM_054253639.1 → XP_054109614.1  Kv channel-interacting protein 4 isoform X3

  5. XM_003732522.6 → XP_003732570.1  Kv channel-interacting protein 4 isoform X1

    See identical proteins and their annotated locations for XP_003732570.1

    UniProtKB/TrEMBL
    F7EUY8
    Related
    ENSCJAP00000023787.1
    Conserved Domains (1) summary
    COG5126
    Location:63 → 222
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  6. XM_054253643.1 → XP_054109618.1  Kv channel-interacting protein 4 isoform X5

  7. XM_054253641.1 → XP_054109616.1  Kv channel-interacting protein 4 isoform X5

Nucleotide Protein
Heading Accession and Version

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