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SPRR1A small proline-rich protein 1A [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100411736, updated on 6-Oct-2023

Summary

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Gene symbol
SPRR1A
Gene description
small proline-rich protein 1A
See related
Ensembl:ENSCJAG00000012049
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
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Genomic context

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Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 18 NC_071459.1 (7072609..7074428)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 18 NC_048400.1 (7091806..7093622)

Chromosome 18 - NC_071459.1Genomic Context describing neighboring genes Neighboring gene small proline rich protein 5 Neighboring gene small proline rich protein 4 Neighboring gene small proline rich protein 3 Neighboring gene cornifin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cornifin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071459.1 Reference mCalJa1.2.pat.X

    Range
    7072609..7074428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008984416.4 → XP_008982664.1  cornifin-A

    UniProtKB/TrEMBL
    A0A8I3WE52
    Related
    ENSCJAP00000022123.2
    Conserved Domains (1) summary
    pfam02389
    Location:35 → 91
    Cornifin; Cornifin (SPRR) family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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