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DIAPH3 diaphanous related formin 3 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100411113, updated on 8-Mar-2024

Summary

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Gene symbol
DIAPH3
Gene description
diaphanous related formin 3
See related
Ensembl:ENSCJAG00000003729
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See DIAPH3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (54741468..55248035)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (54485270..54991840)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128931468 Neighboring gene bax inhibitor 1-like Neighboring gene uncharacterized LOC128931472 Neighboring gene ATP synthase subunit gamma, mitochondrial-like Neighboring gene L-lactate dehydrogenase A chain-like Neighboring gene cx9C motif-containing protein 4-like Neighboring gene 60S ribosomal protein L23a-like Neighboring gene heat shock protein beta-1-like Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein diaphanous homolog 3
Names
diaphanous homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    54741468..55248035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035296778.2 → XP_035152669.1  protein diaphanous homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8I3WPU5, F7GV62
    Conserved Domains (3) summary
    pfam06367
    Location:304 → 487
    Drf_FH3; Diaphanous FH3 Domain
    pfam02181
    Location:635 → 1007
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:114 → 296
    Drf_GBD; Diaphanous GTPase-binding Domain

  2. XM_035296781.2 → XP_035152672.1  protein diaphanous homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A8I3WPU5, F7GVB4
    Conserved Domains (3) summary
    pfam06367
    Location:293 → 476
    Drf_FH3; Diaphanous FH3 Domain
    pfam02181
    Location:624 → 996
    FH2; Formin Homology 2 Domain
    pfam06371
    Location:103 → 285
    Drf_GBD; Diaphanous GTPase-binding Domain
Nucleotide Protein
Heading Accession and Version

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