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LYNX1 Ly6/neurotoxin 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100410279, updated on 8-Mar-2024

Summary

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Gene symbol
LYNX1
Gene description
Ly6/neurotoxin 1
See related
Ensembl:ENSCJAG00000021471
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See LYNX1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 16 NC_071457.1 (53108700..53114919)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 16 NC_048398.1 (53252228..53258471)

Chromosome 16 - NC_071457.1Genomic Context describing neighboring genes Neighboring gene ly6/PLAUR domain-containing protein 2-like Neighboring gene lymphocyte antigen 6 family member D Neighboring gene secreted LY6/PLAUR domain containing 2 Neighboring gene LY6/PLAUR domain containing 2 Neighboring gene secreted LY6/PLAUR domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ly-6/neurotoxin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071457.1 Reference mCalJa1.2.pat.X

    Range
    53108700..53114919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008983135.4 → XP_008981383.1  ly-6/neurotoxin-like protein 1

    See identical proteins and their annotated locations for XP_008981383.1

    UniProtKB/TrEMBL
    F7H437
    Conserved Domains (1) summary
    cd00117
    Location:21 → 94
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

  2. XM_002759180.5 → XP_002759226.1  ly-6/neurotoxin-like protein 1

    See identical proteins and their annotated locations for XP_002759226.1

    UniProtKB/TrEMBL
    F7H437
    Related
    ENSCJAP00000039970.1
    Conserved Domains (1) summary
    cd00117
    Location:21 → 94
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
Nucleotide Protein
Heading Accession and Version

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