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CNIH4 cornichon family member 4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100403161, updated on 8-Mar-2024

Summary

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Gene symbol
CNIH4
Gene description
cornichon family member 4
See related
Ensembl:ENSCJAG00000008013
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See CNIH4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 19 NC_071460.1 (793996..845672, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 19 NC_048401.1 (1821420..1874038, complement)

Chromosome 19 - NC_071460.1Genomic Context describing neighboring genes Neighboring gene cornichon family AMPA receptor auxiliary protein 3 Neighboring gene ADP-ribosylation factor 1-like Neighboring gene WD repeat domain 26 Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene nuclear VCP like Neighboring gene small nucleolar RNA SNORA67

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein cornichon homolog 4
Names
cornichon family AMPA receptor auxiliary protein 4
cornichon homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071460.1 Reference mCalJa1.2.pat.X

    Range
    793996..845672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035281445.2 → XP_035137336.2  protein cornichon homolog 4 isoform X2

  2. XM_054248026.1 → XP_054104001.1  protein cornichon homolog 4 isoform X5

  3. XM_054248024.1 → XP_054103999.1  protein cornichon homolog 4 isoform X5

  4. XM_054248025.1 → XP_054104000.1  protein cornichon homolog 4 isoform X5

  5. XM_035281443.2 → XP_035137334.1  protein cornichon homolog 4 isoform X3

    Conserved Domains (1) summary
    pfam03311
    Location:14 → 98
    Cornichon; Cornichon protein

  6. XM_002760471.6 → XP_002760517.1  protein cornichon homolog 4 isoform X1

    See identical proteins and their annotated locations for XP_002760517.1

    UniProtKB/TrEMBL
    F7IBF5
    Related
    ENSCJAP00000014817.1
    Conserved Domains (1) summary
    pfam03311
    Location:3 → 130
    Cornichon; Cornichon protein

  7. XM_054248027.1 → XP_054104002.1  protein cornichon homolog 4 isoform X5

  8. XM_035281444.2 → XP_035137335.1  protein cornichon homolog 4 isoform X4

    Conserved Domains (1) summary
    pfam03311
    Location:1 → 85
    Cornichon; Cornichon protein

  9. XM_054248028.1 → XP_054104003.1  protein cornichon homolog 4 isoform X5

Nucleotide Protein
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Gene LinkOut

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