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PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100403114, updated on 8-Mar-2024

Summary

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Gene symbol
PCBD1
Gene description
pterin-4 alpha-carbinolamine dehydratase 1
See related
Ensembl:ENSCJAG00000014771
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PCBD1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (55690709..55695954)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (56618990..56624235)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108587832 Neighboring gene histone H1.8-like Neighboring gene sphingosine-1-phosphate lyase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC118146125

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tetrahydrobiopterin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pterin-4-alpha-carbinolamine dehydratase
Names
pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    55690709..55695954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002756263.4 → XP_002756309.1  pterin-4-alpha-carbinolamine dehydratase isoform X3

    See identical proteins and their annotated locations for XP_002756309.1

    UniProtKB/TrEMBL
    A0A2R8PKG2, F7GPT5
    Related
    ENSCJAP00000027201.1
    Conserved Domains (1) summary
    cd00914
    Location:24 → 99
    PCD_DCoH_subfamily_b; PCD_DCoH: The bifunctional protein pterin-4alpha-carbinolamine dehydratase (PCD), also known as DCoH (dimerization cofactor of hepatocyte nuclear factor-1), is both a transcription activator and a metabolic enzyme. DCoH stimulates gene expression by ...

  2. XM_009009778.3 → XP_009008026.1  pterin-4-alpha-carbinolamine dehydratase isoform X2

    See identical proteins and their annotated locations for XP_009008026.1

    UniProtKB/TrEMBL
    A0A2R8PKG2
    Conserved Domains (1) summary
    cd00914
    Location:28 → 103
    PCD_DCoH_subfamily_b; PCD_DCoH: The bifunctional protein pterin-4alpha-carbinolamine dehydratase (PCD), also known as DCoH (dimerization cofactor of hepatocyte nuclear factor-1), is both a transcription activator and a metabolic enzyme. DCoH stimulates gene expression by ...

  3. XM_009009777.4 → XP_009008025.1  pterin-4-alpha-carbinolamine dehydratase isoform X1

    UniProtKB/TrEMBL
    A0A2R8MHV7, A0A2R8PKG2
    Conserved Domains (1) summary
    cd00914
    Location:30 → 105
    PCD_DCoH_subfamily_b; PCD_DCoH: The bifunctional protein pterin-4alpha-carbinolamine dehydratase (PCD), also known as DCoH (dimerization cofactor of hepatocyte nuclear factor-1), is both a transcription activator and a metabolic enzyme. DCoH stimulates gene expression by ...
Nucleotide Protein
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