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MCF2 MCF.2 cell line derived transforming sequence [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100399066, updated on 6-Jun-2024

Summary

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Gene symbol
MCF2
Gene description
MCF.2 cell line derived transforming sequence
See related
Ensembl:ENSCJAG00000010156
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (131802478..131934668, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (132972668..133104901, complement)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene coagulation factor IX Neighboring gene small nucleolar RNA U13 Neighboring gene ATPase phospholipid transporting 11C Neighboring gene U6atac minor spliceosomal RNA Neighboring gene chromosome X CXorf66 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dendrite development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proto-oncogene DBL

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    131802478..131934668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054250816.1 → XP_054106791.1  proto-oncogene DBL isoform X3

    UniProtKB/TrEMBL
    F7H0I7

  2. XM_054250817.1 → XP_054106792.1  proto-oncogene DBL isoform X5

    UniProtKB/TrEMBL
    F7H0I7

  3. XM_054250815.1 → XP_054106790.1  proto-oncogene DBL isoform X2

    UniProtKB/TrEMBL
    F7H0I7

  4. XM_054250814.1 → XP_054106789.1  proto-oncogene DBL isoform X1

    UniProtKB/TrEMBL
    F7H0B9, F7H0I7

  5. XM_035288289.2 → XP_035144180.2  proto-oncogene DBL isoform X4

    UniProtKB/TrEMBL
    A0A5F4W8M6

  6. XM_002763339.6 → XP_002763385.3  proto-oncogene DBL isoform X10

    UniProtKB/TrEMBL
    U3CHJ8, U3EGW8

  7. XM_002763340.6 → XP_002763386.3  proto-oncogene DBL isoform X11

    UniProtKB/TrEMBL
    F7H5I0, U3CHJ8, U3EGW8

  8. XM_035288292.2 → XP_035144183.2  proto-oncogene DBL isoform X9

    UniProtKB/TrEMBL
    U3E6F6

  9. XM_035288291.2 → XP_035144182.2  proto-oncogene DBL isoform X8

    UniProtKB/TrEMBL
    U3E6F6

  10. XM_002763336.6 → XP_002763382.3  proto-oncogene DBL isoform X7

    UniProtKB/TrEMBL
    U3E6F6, U3F1F1

  11. XM_035288290.2 → XP_035144181.2  proto-oncogene DBL isoform X6

    UniProtKB/TrEMBL
    F7H0F4, U3E6F6
Nucleotide Protein
Heading Accession and Version

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