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ABCB4 ATP binding cassette subfamily B member 4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100398854, updated on 3-Apr-2024

Summary

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Gene symbol
ABCB4
Gene description
ATP binding cassette subfamily B member 4
See related
Ensembl:ENSCJAG00000014623
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human all
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Genomic context

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See ABCB4 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (59568268..59636046)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (60378648..60446441)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene RUN domain containing 3B Neighboring gene uncharacterized LOC118143689 Neighboring gene small nucleolar RNA U13 Neighboring gene ATP binding cassette subfamily B member 1 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene carnitine O-octanoyltransferase Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene transmembrane protein 243

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine translocator ABCB4
Names
multidrug resistance protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    59568268..59636046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003733599.4 → XP_003733647.2  phosphatidylcholine translocator ABCB4 isoform X1

  2. XM_054237820.1 → XP_054093795.1  phosphatidylcholine translocator ABCB4 isoform X2

    UniProtKB/TrEMBL
    A0A2R8MZC8

  3. XM_035253930.2 → XP_035109821.2  phosphatidylcholine translocator ABCB4 isoform X3

  4. XM_054237819.1 → XP_054093794.1  phosphatidylcholine translocator ABCB4 isoform X1

  5. XM_054237822.1 → XP_054093797.1  phosphatidylcholine translocator ABCB4 isoform X5

  6. XM_054237821.1 → XP_054093796.1  phosphatidylcholine translocator ABCB4 isoform X4

  7. XM_035253931.2 → XP_035109822.2  phosphatidylcholine translocator ABCB4 isoform X5

  8. XM_017975389.3 → XP_017830878.2  phosphatidylcholine translocator ABCB4 isoform X6

  9. XM_054237823.1 → XP_054093798.1  phosphatidylcholine translocator ABCB4 isoform X7

Nucleotide Protein
Heading Accession and Version

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