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DEFB118 defensin beta 118 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100397120, updated on 2-Nov-2023

Summary

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Gene symbol
DEFB118
Gene description
defensin beta 118
See related
Ensembl:ENSCJAG00000020814
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
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Genomic context

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See DEFB118 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (5727376..5730206, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (5640020..5642851, complement)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene beta-defensin 121 Neighboring gene defensin beta 119 Neighboring gene HAUS augmin-like complex subunit 6 Neighboring gene defensin beta 116

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
defensin beta 118

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    5727376..5730206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002747388.5 → XP_002747434.1  defensin beta 118

    UniProtKB/TrEMBL
    A0A2R8MX32
    Related
    ENSCJAP00000038722.2
    Conserved Domains (1) summary
    pfam13841
    Location:26 → 55
    Defensin_beta_2; Beta defensin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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