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C2H5orf24 chromosome 2 C5orf24 homolog [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100392132, updated on 8-Mar-2024

Summary

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Gene symbol
C2H5orf24
Gene description
chromosome 2 C5orf24 homolog
See related
Ensembl:ENSCJAG00000005779
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See C2H5orf24 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 2 NC_071443.1 (31305691..31319412)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 2 NC_048384.1 (31580043..31593780)

Chromosome 2 - NC_071443.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene DEAD-box helicase 46 Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene thioredoxin domain containing 15 Neighboring gene pterin-4 alpha-carbinolamine dehydratase 2 Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
UPF0461 protein C5orf24 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071443.1 Reference mCalJa1.2.pat.X

    Range
    31305691..31319412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002744168.6 → XP_002744214.1  UPF0461 protein C5orf24 homolog isoform X2

    See identical proteins and their annotated locations for XP_002744214.1

    UniProtKB/TrEMBL
    F7HZ39
    Related
    ENSCJAP00000010616.1

  2. XM_008985068.4 → XP_008983316.1  UPF0461 protein C5orf24 homolog isoform X1

    See identical proteins and their annotated locations for XP_008983316.1

    UniProtKB/TrEMBL
    F7DCU5
    Related
    ENSCJAP00000015586.2
    Conserved Domains (1) summary
    pfam17724
    Location:1 → 188
    DUF5568; Family of unknown function (DUF5568)

  3. XM_008985088.4 → XP_008983336.1  UPF0461 protein C5orf24 homolog isoform X2

    See identical proteins and their annotated locations for XP_008983336.1

    UniProtKB/TrEMBL
    F7HZ39

  4. XM_035285036.2 → XP_035140927.1  UPF0461 protein C5orf24 homolog isoform X1

    UniProtKB/TrEMBL
    F7DCU5
    Conserved Domains (1) summary
    pfam17724
    Location:1 → 188
    DUF5568; Family of unknown function (DUF5568)

RNA

  1. XR_004738049.2 RNA Sequence

Nucleotide Protein
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