U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGXT alanine--glyoxylate aminotransferase [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100390388, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
AGXT
Gene description
alanine--glyoxylate aminotransferase
See related
Ensembl:ENSCJAG00000006403
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
AGT; SPT; AGT1
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AGXT in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (158618280..158629145)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (159929573..159940462)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 1A Neighboring gene uncharacterized LOC128932457 Neighboring gene uncharacterized LOC108592324 Neighboring gene mab-21 like 4 Neighboring gene ciliary rootlet coiled-coil, rootletin family member 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular evolution of alanine/glyoxylate aminotransferase 1 intracellular targeting. Analysis of the marmoset and rabbit genes. Purdue PE, et al. Eur J Biochem, 1992 Jul 15. PMID 1339350
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alanine-glyoxylate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-pyruvate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine biosynthetic process, by transamination of glyoxylate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alanine--glyoxylate aminotransferase
Names
Serine--pyruvate aminotransferase, mitochondrial
alanine--glyoxylate and serine--pyruvate aminotransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    158618280..158629145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035306303.2 → XP_035162194.1  alanine--glyoxylate aminotransferase isoform X2

    UniProtKB/Swiss-Prot
    P31029
    Conserved Domains (1) summary
    cl18945
    Location:46 → 340
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  2. XM_002749974.5 → XP_002750020.3  alanine--glyoxylate aminotransferase isoform X1

    UniProtKB/Swiss-Prot
    P31029
    UniProtKB/TrEMBL
    A0A5F4WJH9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P31029.1 GenPept UniProtKB/Swiss-Prot:P31029

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.