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STXBP6 syntaxin binding protein 6 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100389571, updated on 8-Mar-2024

Summary

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Gene symbol
STXBP6
Gene description
syntaxin binding protein 6
See related
Ensembl:ENSCJAG00000006270
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See STXBP6 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 10 NC_071451.1 (54844225..55120103, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 10 NC_048392.1 (55500080..55776046, complement)

Chromosome 10 - NC_071451.1Genomic Context describing neighboring genes Neighboring gene granzyme H Neighboring gene granzyme B Neighboring gene 40S ribosomal protein S2-like Neighboring gene uncharacterized LOC118145111

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of SNARE complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-binding protein 6
Names
syntaxin binding protein 6 (amisyn)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071451.1 Reference mCalJa1.2.pat.X

    Range
    54844225..55120103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009005857.3 → XP_009004105.2  syntaxin-binding protein 6

    UniProtKB/TrEMBL
    F7I8N7, F7IB24, U3BGD1
    Conserved Domains (2) summary
    cd14681
    Location:2 → 131
    PH-STXBP6; PH-like domain of Syntaxin binding protein 6
    cd15892
    Location:149 → 210
    R-SNARE_STXBP6; SNARE domain of STXBP6

  2. XM_035260246.2 → XP_035116137.1  syntaxin-binding protein 6

    UniProtKB/TrEMBL
    F7I8N7, F7IB24, U3BGD1
    Conserved Domains (2) summary
    cd14681
    Location:2 → 131
    PH-STXBP6; PH-like domain of Syntaxin binding protein 6
    cd15892
    Location:149 → 210
    R-SNARE_STXBP6; SNARE domain of STXBP6
Nucleotide Protein
Heading Accession and Version

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