U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MTM1 myotubularin 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100387480, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
MTM1
Gene description
myotubularin 1
See related
Ensembl:ENSCJAG00000004040
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MTM1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (142288886..142401535)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (143534214..143646825)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene protein EOLA1 Neighboring gene mastermind like domain containing 1 Neighboring gene tether containing UBX domain for GLUT4-like Neighboring gene myotubularin related protein 1 Neighboring gene uncharacterized LOC128930660 Neighboring gene CD99 molecule like 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    142288886..142401535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002763363.4 → XP_002763409.1  myotubularin isoform X1

    See identical proteins and their annotated locations for XP_002763409.1

    UniProtKB/TrEMBL
    A0A8I3WMJ2, U3BTU5
    Related
    ENSCJAP00000019244.2
    Conserved Domains (2) summary
    cd13355
    Location:44 → 143
    PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:162 → 489
    Myotub-related; Myotubularin-like phosphatase domain

  2. XM_008990023.2 → XP_008988271.1  myotubularin isoform X2

    UniProtKB/TrEMBL
    A0A8I3WMJ2
    Conserved Domains (2) summary
    cd13355
    Location:44 → 143
    PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:150 → 483
    Myotub-related; Myotubularin-like phosphatase domain

  3. XM_035289653.2 → XP_035145544.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A8I3WMJ2, U3BTU5
    Conserved Domains (2) summary
    cd13355
    Location:44 → 143
    PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:162 → 489
    Myotub-related; Myotubularin-like phosphatase domain

  4. XM_054251480.1 → XP_054107455.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    U3BTU5

  5. XM_054251481.1 → XP_054107456.1  myotubularin isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.