U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386684, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MSANTD4
Gene description
Myb/SANT DNA binding domain containing 4 with coiled-coils
See related
Ensembl:ENSCJAG00000009913
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MSANTD4 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 11 NC_071452.1 (3669210..3682625, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 11 NC_048393.1 (3622232..3637854, complement)

Chromosome 11 - NC_071452.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family member 18 Neighboring gene dnaJ homolog subfamily A member 1-like Neighboring gene glutamate ionotropic receptor AMPA type subunit 4 Neighboring gene U4 spliceosomal RNA Neighboring gene aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase Neighboring gene kelch repeat and BTB domain containing 3 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
myb/SANT-like DNA-binding domain-containing protein 4
Names
Myb/SANT-like DNA-binding domain containing 4 with coiled-coils

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071452.1 Reference mCalJa1.2.pat.X

    Range
    3669210..3682625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009006717.4 → XP_009004965.1  myb/SANT-like DNA-binding domain-containing protein 4

    See identical proteins and their annotated locations for XP_009004965.1

    UniProtKB/TrEMBL
    F7H1J7
    Conserved Domains (2) summary
    COG1196
    Location:209 → 341
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam13873
    Location:8 → 86
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

  2. XM_009006716.4 → XP_009004964.1  myb/SANT-like DNA-binding domain-containing protein 4

    See identical proteins and their annotated locations for XP_009004964.1

    UniProtKB/TrEMBL
    F7H1J7
    Conserved Domains (2) summary
    COG1196
    Location:209 → 341
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam13873
    Location:8 → 86
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

  3. XM_009006718.4 → XP_009004966.1  myb/SANT-like DNA-binding domain-containing protein 4

    See identical proteins and their annotated locations for XP_009004966.1

    UniProtKB/TrEMBL
    F7H1J7
    Related
    ENSCJAP00000018200.2
    Conserved Domains (2) summary
    COG1196
    Location:209 → 341
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam13873
    Location:8 → 86
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

  4. XM_035264417.2 → XP_035120308.1  myb/SANT-like DNA-binding domain-containing protein 4

    UniProtKB/TrEMBL
    F7H1J7
    Conserved Domains (2) summary
    COG1196
    Location:209 → 341
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam13873
    Location:8 → 86
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

  5. XM_035264416.2 → XP_035120307.1  myb/SANT-like DNA-binding domain-containing protein 4

    UniProtKB/TrEMBL
    F7H1J7
    Conserved Domains (2) summary
    COG1196
    Location:209 → 341
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam13873
    Location:8 → 86
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.