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PPP1R17 protein phosphatase 1 regulatory subunit 17 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100385602, updated on 8-Mar-2024

Summary

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Gene symbol
PPP1R17
Gene description
protein phosphatase 1 regulatory subunit 17
See related
Ensembl:ENSCJAG00000009021
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PPP1R17 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 8 NC_071449.1 (23892330..23914137, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 8 NC_048390.1 (24696731..24718539, complement)

Chromosome 8 - NC_071449.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118143632 Neighboring gene U4 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene COP9 signalosome complex subunit 2-like Neighboring gene uncharacterized LOC118143633 Neighboring gene ITPR interacting domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071449.1 Reference mCalJa1.2.pat.X

    Range
    23892330..23914137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002751427.6 → XP_002751473.1  protein phosphatase 1 regulatory subunit 17 isoform X1

    See identical proteins and their annotated locations for XP_002751473.1

    UniProtKB/TrEMBL
    A0A2R8P7E7, U3EGS7
    Related
    ENSCJAP00000016531.2

  2. XM_035253470.2 → XP_035109361.1  protein phosphatase 1 regulatory subunit 17 isoform X2

    UniProtKB/TrEMBL
    A0A8I3WKV4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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