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lsm11.S LSM11, U7 small nuclear RNA associated S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100381151, updated on 6-Oct-2023

Summary

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Official Symbol
lsm11.S
Official Full Name
LSM11, U7 small nuclear RNA associated S homeolog
Primary source
Xenbase:XB-GENE-6255756
Locus tag
XELAEV_18019955mg
See related
EnsemblRapid:ENSXLAG00005021548
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
lsm11
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Genomic context

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See lsm11.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (10434373..10438585)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (10443516..10447706)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene NIPA-like domain containing 4 S homeolog Neighboring gene ADAM metallopeptidase domain 19 S homeolog Neighboring gene clathrin interactor 1 S homeolog Neighboring gene uncharacterized LOC108712447

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unique Sm core structure of U7 snRNPs: assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing. Pillai RS, et al. Genes Dev, 2003 Sep 15. PMID 12975319, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
U7 snRNA-associated Sm-like protein LSm11
Names
U7 snRNA-associated Sm-like protein Lsm11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    10434373..10438585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018254884.2 → XP_018110373.1  U7 snRNA-associated Sm-like protein LSm11

    UniProtKB/Swiss-Prot
    A0A1L8GQX3, Q3KPW8, Q7T076
    UniProtKB/TrEMBL
    Q0IH70
    Related
    ENSXLAP00005063276.1, ENSXLAT00005064739.1
Nucleotide Protein Strain
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Gene LinkOut

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