lppr1 Lipid phosphate phosphatase-related protein type 1 [Salmo salar (Atlantic salmon)] - Gene

Summary

Gene symbol: lppr1
Gene description: Lipid phosphate phosphatase-related protein type 1
See related: Ensembl:ENSSSAG00000004313
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Salmo salar
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

Location:: chromosome: ssa01

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
102	current	Ssal_v3.1 (GCF_905237065.1)	ssa01	NC_059442.1 (172503210..172523334)
100	previous assembly	ICSASG_v2 (GCF_000233375.1)	ssa01	NC_027300.1 (155737191..155754594, complement)

Chromosome ssa01 - NC_059442.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables phosphatidate phosphatase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in phospholipid dephosphorylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in phospholipid metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in signal transduction	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: Lipid phosphate phosphatase-related protein type 1; lipid phosphate phosphatase-related protein type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001173894.1 → NP_001167365.1 Lipid phosphate phosphatase-related protein type 1

Status: PROVISIONAL

Source sequence(s)

BT059768

UniProtKB/TrEMBL

C0HBR2

Conserved Domains (1) summary

cd03384
Location:122 → 271

PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

NC_059442.1 Reference Ssal_v3.1

Range

172503210..172523334

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_045689709.1 → XP_045545665.1 lipid phosphate phosphatase-related protein type 1 isoform X1

UniProtKB/TrEMBL

C0HBR2

Related

ENSSSAP00000132789.1, ENSSSAT00000216982.1

Conserved Domains (1) summary

cd03384
Location:122 → 271

PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...