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CPR17 cuticular protein RR-1 motif 17 [ Bombyx mori (domestic silkworm) ]

Gene ID: 100379449, updated on 9-Feb-2024

Summary

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Gene symbol
CPR17
Gene description
cuticular protein RR-1 motif 17
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
BmorCPR17
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Genomic context

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Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 19 NC_085125.1 (906409..918822)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 19 NC_051376.1 (1302742..1315155, complement)

Chromosome 19 - NC_085125.1Genomic Context describing neighboring genes Neighboring gene cuticular protein RR-1 motif 19 Neighboring gene cuticular protein RR-1 motif 18 Neighboring gene cuticular protein RR-1 motif 16 Neighboring gene filaggrin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of cuticular protein genes in the silkworm, Bombyx mori. Futahashi R, et al. Insect Biochem Mol Biol, 2008 Dec. PMID 19280704
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chitin-based extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cuticular protein RR-1 motif 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001173260.1 → NP_001166731.1  cuticular protein RR-1 motif 17 precursor

    See identical proteins and their annotated locations for NP_001166731.1

    Status: PROVISIONAL

    Source sequence(s)
    BR000518
    UniProtKB/TrEMBL
    C0H6K8
    Conserved Domains (1) summary
    pfam00379
    Location:50 → 99
    Chitin_bind_4; Insect cuticle protein

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085125.1 Reference ASM3026992v2 Primary Assembly

    Range
    906409..918822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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