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C5h9orf85 similar to human chromosome 9 open reading frame 85 [ Rattus norvegicus (Norway rat) ]

Gene ID: 100362345, updated on 29-Feb-2024

Summary

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Official Symbol
C5h9orf85provided by RGD
Official Full Name
similar to human chromosome 9 open reading frame 85provided by RGD
Primary source
RGD:2318341
See related
Ensembl:ENSRNOG00000024197 AllianceGenome:RGD:2318341
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See C5h9orf85 in Genome Data Viewer
Location:
5q32
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (108882379..108883795, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (103767094..103767986, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (107608029..107608906, complement)

Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130062808 Neighboring gene N-myristoyltransferase 1, pseudogene 1 Neighboring gene uncharacterized LOC108350998 Neighboring gene ARL14 effector protein-like Neighboring gene RNA N6-adenosine-methyltransferase METTL16-like Neighboring gene methylthioadenosine phosphorylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
uncharacterized protein C9orf85 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086023.1 Reference GRCr8

    Range
    108882379..108883795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039111101.2 → XP_038967029.1  uncharacterized protein C9orf85 homolog

    UniProtKB/TrEMBL
    A0A8I6A0S1
    Related
    ENSRNOP00000085008.1
    Conserved Domains (1) summary
    pfam10217
    Location:14 → 101
    DUF2039; Uncharacterized conserved protein (DUF2039)
Nucleotide Protein Strain
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