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CELF4 CUGBP Elav-like family member 4 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100354032, updated on 6-Jun-2024

Summary

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Gene symbol
CELF4
Gene description
CUGBP Elav-like family member 4
See related
Ensembl:ENSOCUG00000024790
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See CELF4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 9 NC_067382.1 (37470798..37739337)

Chromosome 9 - NC_067382.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103349326 Neighboring gene uncharacterized LOC103349325 Neighboring gene uncharacterized LOC127492296 Neighboring gene 60S ribosomal protein L32-like Neighboring gene KIAA1328 ortholog Neighboring gene serine palmitoyltransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067382.1 Chromosome 9 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CUGBP Elav-like family member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067382.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    37470798..37739337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051851268.1 → XP_051707228.1  CUGBP Elav-like family member 4 isoform X2

    UniProtKB/TrEMBL
    A0A5F9CEI6

  2. XM_051851269.1 → XP_051707229.1  CUGBP Elav-like family member 4 isoform X3

    UniProtKB/TrEMBL
    A0A5F9CEI6

  3. XM_017344125.2 → XP_017199614.1  CUGBP Elav-like family member 4 isoform X7

    UniProtKB/TrEMBL
    A0A5F9C8A1

  4. XM_017344127.2 → XP_017199616.1  CUGBP Elav-like family member 4 isoform X8

    UniProtKB/TrEMBL
    A0A5F9C8A1

  5. XM_051851274.1 → XP_051707234.1  CUGBP Elav-like family member 4 isoform X14

    UniProtKB/TrEMBL
    A0A5F9C8A1

  6. XM_017344132.2 → XP_017199621.1  CUGBP Elav-like family member 4 isoform X48

    UniProtKB/TrEMBL
    A0A5F9C8A1

  7. XM_051851267.1 → XP_051707227.1  CUGBP Elav-like family member 4 isoform X1

    UniProtKB/TrEMBL
    A0A5F9CEI6

  8. XM_051851270.1 → XP_051707230.1  CUGBP Elav-like family member 4 isoform X4

    UniProtKB/TrEMBL
    A0A5F9CEI6

  9. XM_017344137.2 → XP_017199626.1  CUGBP Elav-like family member 4 isoform X5

    UniProtKB/TrEMBL
    A0A5F9C8A1

  10. XM_017344123.2 → XP_017199612.1  CUGBP Elav-like family member 4 isoform X6

    UniProtKB/TrEMBL
    A0A5F9C8A1

  11. XM_017344130.2 → XP_017199619.1  CUGBP Elav-like family member 4 isoform X12

    UniProtKB/TrEMBL
    A0A5F9C8A1, A0A5F9DRU6
    Related
    ENSOCUP00000049118.1

  12. XM_017344128.2 → XP_017199617.1  CUGBP Elav-like family member 4 isoform X9

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Related
    ENSOCUP00000043846.1

  13. XM_051851272.1 → XP_051707232.1  CUGBP Elav-like family member 4 isoform X11

    UniProtKB/TrEMBL
    A0A5F9C8A1

  14. XM_051851271.1 → XP_051707231.1  CUGBP Elav-like family member 4 isoform X10

    UniProtKB/TrEMBL
    A0A5F9C8A1

  15. XM_051851273.1 → XP_051707233.1  CUGBP Elav-like family member 4 isoform X13

    UniProtKB/TrEMBL
    A0A5F9C8A1

  16. XM_051851277.1 → XP_051707237.1  CUGBP Elav-like family member 4 isoform X17

    UniProtKB/TrEMBL
    A0A5F9C8A1

  17. XM_008261244.3 → XP_008259466.1  CUGBP Elav-like family member 4 isoform X35

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 457
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:416 → 456
    RRM_SF; RNA recognition motif (RRM) superfamily

  18. XM_051851286.1 → XP_051707246.1  CUGBP Elav-like family member 4 isoform X36

    UniProtKB/TrEMBL
    A0A5F9C8A1

  19. XM_017344135.2 → XP_017199624.1  CUGBP Elav-like family member 4 isoform X24

    UniProtKB/TrEMBL
    A0A5F9C8A1

  20. XM_051851288.1 → XP_051707248.1  CUGBP Elav-like family member 4 isoform X38

    UniProtKB/TrEMBL
    A0A5F9C8A1

  21. XM_051851287.1 → XP_051707247.1  CUGBP Elav-like family member 4 isoform X37

    UniProtKB/TrEMBL
    A0A5F9C8A1

  22. XM_051851289.1 → XP_051707249.1  CUGBP Elav-like family member 4 isoform X39

    UniProtKB/TrEMBL
    A0A5F9C8A1

  23. XM_051851290.1 → XP_051707250.1  CUGBP Elav-like family member 4 isoform X40

    UniProtKB/TrEMBL
    A0A5F9C8A1

  24. XM_051851275.1 → XP_051707235.1  CUGBP Elav-like family member 4 isoform X15

    UniProtKB/TrEMBL
    A0A5F9C8A1

  25. XM_051851292.1 → XP_051707252.1  CUGBP Elav-like family member 4 isoform X43

    UniProtKB/TrEMBL
    A0A5F9C8A1

  26. XM_051851293.1 → XP_051707253.1  CUGBP Elav-like family member 4 isoform X44

    UniProtKB/TrEMBL
    A0A5F9C8A1

  27. XM_051851296.1 → XP_051707256.1  CUGBP Elav-like family member 4 isoform X47

    UniProtKB/TrEMBL
    A0A5F9C8A1

  28. XM_051851276.1 → XP_051707236.1  CUGBP Elav-like family member 4 isoform X16

    UniProtKB/TrEMBL
    A0A5F9C8A1, A0A5F9DEU8

  29. XM_051851294.1 → XP_051707254.1  CUGBP Elav-like family member 4 isoform X45

    UniProtKB/TrEMBL
    A0A5F9C8A1

  30. XM_051851295.1 → XP_051707255.1  CUGBP Elav-like family member 4 isoform X46

    UniProtKB/TrEMBL
    A0A5F9C8A1

  31. XM_008261239.3 → XP_008259461.1  CUGBP Elav-like family member 4 isoform X18

    UniProtKB/TrEMBL
    A0A5F9C8A1, G1TK12
    Related
    ENSOCUP00000017293.3
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 486
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:417 → 475
    RRM_SF; RNA recognition motif (RRM) superfamily

  32. XM_017344136.2 → XP_017199625.1  CUGBP Elav-like family member 4 isoform X33

    UniProtKB/TrEMBL
    A0A5F9C8A1

  33. XM_008261240.3 → XP_008259462.1  CUGBP Elav-like family member 4 isoform X20

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 485
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:416 → 474
    RRM_SF; RNA recognition motif (RRM) superfamily

  34. XM_051851279.1 → XP_051707239.1  CUGBP Elav-like family member 4 isoform X21

    UniProtKB/TrEMBL
    A0A5F9C8A1

  35. XM_008261243.3 → XP_008259465.1  CUGBP Elav-like family member 4 isoform X34

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 457
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:416 → 456
    RRM_SF; RNA recognition motif (RRM) superfamily

  36. XM_008261241.3 → XP_008259463.1  CUGBP Elav-like family member 4 isoform X22

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 484
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:415 → 473
    RRM_SF; RNA recognition motif (RRM) superfamily

  37. XM_008261242.3 → XP_008259464.1  CUGBP Elav-like family member 4 isoform X23

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 484
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:415 → 473
    RRM_SF; RNA recognition motif (RRM) superfamily

  38. XM_051851280.1 → XP_051707240.1  CUGBP Elav-like family member 4 isoform X25

    UniProtKB/TrEMBL
    A0A5F9C8A1

  39. XM_008261246.3 → XP_008259468.1  CUGBP Elav-like family member 4 isoform X41

    UniProtKB/TrEMBL
    A0A5F9C8A1, A0A5F9D318
    Related
    ENSOCUP00000040567.1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 448
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:407 → 447
    RRM_SF; RNA recognition motif (RRM) superfamily

  40. XM_051851283.1 → XP_051707243.1  CUGBP Elav-like family member 4 isoform X28

    UniProtKB/TrEMBL
    A0A5F9C8A1

  41. XM_051851297.1 → XP_051707257.1  CUGBP Elav-like family member 4 isoform X49

    UniProtKB/TrEMBL
    A0A5F9C8A1

  42. XM_017344138.2 → XP_017199627.1  CUGBP Elav-like family member 4 isoform X31

    UniProtKB/TrEMBL
    A0A5F9C8A1

  43. XM_051851291.1 → XP_051707251.1  CUGBP Elav-like family member 4 isoform X42

    UniProtKB/TrEMBL
    A0A5F9C8A1

  44. XM_008261245.3 → XP_008259467.2  CUGBP Elav-like family member 4 isoform X29

    UniProtKB/TrEMBL
    A0A5F9C8A1

  45. XM_051851284.1 → XP_051707244.1  CUGBP Elav-like family member 4 isoform X30

    UniProtKB/TrEMBL
    A0A5F9C8A1

  46. XM_051851285.1 → XP_051707245.1  CUGBP Elav-like family member 4 isoform X32

    UniProtKB/TrEMBL
    A0A5F9C8A1

  47. XM_051851278.1 → XP_051707238.1  CUGBP Elav-like family member 4 isoform X18

    UniProtKB/TrEMBL
    A0A5F9C8A1, G1TK12

  48. XM_008261247.3 → XP_008259469.1  CUGBP Elav-like family member 4 isoform X19

    UniProtKB/TrEMBL
    A0A5F9C8A1
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:56 → 485
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:416 → 474
    RRM_SF; RNA recognition motif (RRM) superfamily

  49. XM_051851281.1 → XP_051707241.1  CUGBP Elav-like family member 4 isoform X26

    UniProtKB/TrEMBL
    A0A5F9C8A1

  50. XM_051851282.1 → XP_051707242.1  CUGBP Elav-like family member 4 isoform X27

    UniProtKB/TrEMBL
    A0A5F9C8A1
Nucleotide Protein
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