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YIF1B Yip1 interacting factor homolog B, membrane trafficking protein [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100353339, updated on 3-Apr-2024

Summary

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Gene symbol
YIF1B
Gene description
Yip1 interacting factor homolog B, membrane trafficking protein
See related
Ensembl:ENSOCUG00000003234
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See YIF1B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 5 NC_067378.1 (2390828..2400858, complement)

Chromosome 5 - NC_067378.1Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor, Kunitz type 2 Neighboring gene chromosome 5 C19orf33 homolog Neighboring gene potassium two pore domain channel subfamily K member 6 Neighboring gene octapeptide-repeat protein T2 Neighboring gene cation channel sperm associated auxiliary subunit gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067378.1 Chromosome 5 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein YIF1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067378.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    2390828..2400858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002711498.4 → XP_002711544.1  protein YIF1B isoform X3

    UniProtKB/TrEMBL
    A0A5F9DHY3
    Conserved Domains (1) summary
    pfam03878
    Location:76 → 303
    YIF1; YIF1

  2. XM_008257245.3 → XP_008255467.1  protein YIF1B isoform X2

    UniProtKB/TrEMBL
    A0A5F9DHY3
    Conserved Domains (1) summary
    pfam03878
    Location:79 → 306
    YIF1; YIF1

  3. XM_008257248.3 → XP_008255470.2  protein YIF1B isoform X1

  4. XM_008257246.3 → XP_008255468.1  protein YIF1B isoform X4

    UniProtKB/TrEMBL
    G1TRA9
    Related
    ENSOCUP00000045390.1
    Conserved Domains (1) summary
    pfam03878
    Location:63 → 290
    YIF1; YIF1
Nucleotide Protein
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