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DDB2 damage specific DNA binding protein 2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100352386, updated on 8-Mar-2024

Summary

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Gene symbol
DDB2
Gene description
damage specific DNA binding protein 2
See related
Ensembl:ENSOCUG00000002076
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See DDB2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (200332826..200351098)

Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor GTPase activating protein 2 Neighboring gene protein kinase C and casein kinase substrate in neurons 3 Neighboring gene acid phosphatase 2, lysosomal Neighboring gene nuclear receptor subfamily 1 group H member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to UV IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA damage-binding protein 2
Names
damage-specific DNA binding protein 2, 48kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    200332826..200351098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002709089.3 → XP_002709135.1  DNA damage-binding protein 2

    UniProtKB/TrEMBL
    A0A5F9CGR0, G1SGS2
    Related
    ENSOCUP00000001792.2, ENSOCUT00000002076.2
    Conserved Domains (3) summary
    COG2319
    Location:115 → 401
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:115 → 154
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:115 → 419
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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Research Materials