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LOC100342100 rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100342100, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100342100
Gene description
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
PDE6B
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026256995.1 (239..11522)

NW_026256995.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit e Neighboring gene solute carrier family 49 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026256995 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retina development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in photoreceptor outer segment membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
Names
phosphodiesterase 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NW_026256995.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    239..11522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051828014.1 → XP_051683974.1  rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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