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SMARCD1 SWI/SNF related BAF chromatin remodeling complex subunit D1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100339222, updated on 20-Sep-2024

Summary

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Gene symbol
SMARCD1
Gene description
SWI/SNF related BAF chromatin remodeling complex subunit D1
See related
Ensembl:ENSOCUG00000015715
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (41829583..41842216)

Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene Rac GTPase activating protein 1 Neighboring gene acid sensing ion channel subunit 1 Neighboring gene cytochrome c oxidase assembly protein COX14 Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene ceramide synthase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
Names
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    41829583..41842216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008256439.3 → XP_008254661.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

    UniProtKB/TrEMBL
    A0A5F9CV71, G1TA25
    Related
    ENSOCUP00000013505.2
    Conserved Domains (3) summary
    smart00151
    Location:291 → 367
    SWIB; SWI complex, BAF60b domains
    COG5531
    Location:207 → 408
    Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
    pfam02084
    Location:39 → 98
    Bindin; Bindin
Nucleotide Protein
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Gene LinkOut

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