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RHBDL1 rhomboid like 1 [ Bos taurus (domestic cattle) ]

Gene ID: 100336895, updated on 17-Aug-2024

Summary

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Official Symbol
RHBDL1provided by VGNC
Official Full Name
rhomboid like 1provided by VGNC
Primary source
VGNC:VGNC:33935
See related
Ensembl:ENSBTAG00000017284
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (579680..582720)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 90 Neighboring gene ras homolog family member T2 Neighboring gene CG2446-like Neighboring gene STIP1 homology and U-box containing protein 1 Neighboring gene jumonji domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhomboid-related protein 1
Names
rhomboid, veinlet-like 1
XP_024841162.1
XP_024841163.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    579680..582720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024985395.2 → XP_024841163.1  rhomboid-related protein 1 isoform X2

    Conserved Domains (1) summary
    cl21536
    Location:256 → 311
    Rhomboid; Rhomboid family

  2. XM_024985394.2 → XP_024841162.1  rhomboid-related protein 1 isoform X1

    UniProtKB/TrEMBL
    F1MEJ0
    Related
    ENSBTAP00000022975.5, ENSBTAT00000022975.5
    Conserved Domains (1) summary
    pfam01694
    Location:256 → 410
    Rhomboid; Rhomboid family
Nucleotide Protein Strain
Heading Accession and Version

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