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LOC100333218 interferon-inducible GTPase 5-like [ Danio rerio (zebrafish) ]

Gene ID: 100333218, updated on 27-Mar-2024

Summary

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Gene symbol
LOC100333218
Gene description
interferon-inducible GTPase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See LOC100333218 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (25958362..25962628, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (26037055..26041574)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103908933 Neighboring gene uncharacterized LOC110437799 Neighboring gene interferon-inducible GTPase 5 Neighboring gene serine protease 59, tandem duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
interferon-inducible GTPase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    25958362..25962628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005173525.4 → XP_005173582.1  interferon-inducible GTPase 5-like

    UniProtKB/TrEMBL
    A0A8M9PK25
    Conserved Domains (1) summary
    cl21455
    Location:299 → 490
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_021466916.1 → XP_021322591.1  interferon-inducible GTPase 5-like

    UniProtKB/TrEMBL
    A0A8M9PK25
    Conserved Domains (1) summary
    cl21455
    Location:299 → 490
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
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