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Cbfb core binding factor beta subunit [ Saccoglossus kowalevskii ]

Gene ID: 100313579, updated on 19-Oct-2023

Summary

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Gene symbol
Cbfb
Gene description
core binding factor beta subunit
See related
EnsemblRapid:GeneID_100313579
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003126390.1 (96509..125181)

NW_003126390.1Genomic Context describing neighboring genes Neighboring gene lisH domain and HEAT repeat-containing protein KIAA1468-like Neighboring gene GPI ethanolamine phosphate transferase 1-like Neighboring gene katanin p80 WD40 repeat-containing subunit B1-like Neighboring gene UPF0598 protein C8orf82 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003126390 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of core-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
core binding factor beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001168047.1 → NP_001161519.1  core binding factor beta subunit

    See identical proteins and their annotated locations for NP_001161519.1

    Status: PROVISIONAL

    Source sequence(s)
    GU075966
    UniProtKB/TrEMBL
    D1LWY9
    Related
    NP_001161519.1, NM_001168047.1
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 161
    CBF_beta; Core binding factor beta subunit

RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003126390.1 Reference Skow_1.1 Primary Assembly

    Range
    96509..125181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006816919.1 → XP_006816982.1  core binding factor beta subunit

    Related
    XP_006816982.1, XM_006816919.1
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 161
    CBF_beta; Core binding factor beta subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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