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msi2 musashi homolog 2 [ Saccoglossus kowalevskii ]

Gene ID: 100302729, updated on 25-Jan-2024

Summary

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Gene symbol
msi2
Gene description
musashi homolog 2
See related
EnsemblRapid:GeneID_100302729
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003142819.1 (4946..107756)

NW_003142819.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 9-like Neighboring gene proprotein convertase subtilisin/kexin type 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003142819 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Anteroposterior patterning in hemichordates and the origins of the chordate nervous system. Lowe CJ, et al. Cell, 2003 Jun 27. PMID 12837244

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
musashi homolog 2
Names
musashi nrp-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164892.1 → NP_001158364.1  musashi homolog 2

    See identical proteins and their annotated locations for NP_001158364.1

    Status: PROVISIONAL

    Source sequence(s)
    AY313138
    UniProtKB/TrEMBL
    Q7YTD5
    Related
    NP_001158364.1, NM_001164892.1
    Conserved Domains (2) summary
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003142819.1 Reference Skow_1.1 Primary Assembly

    Range
    4946..107756
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006821874.1 → XP_006821937.1  musashi homolog 2

    Related
    XP_006821937.1, XM_006821874.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 351
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  2. XM_006821875.1 → XP_006821938.1  musashi homolog 2

    Related
    XP_006821938.1, XM_006821875.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 338
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  3. XM_006821879.1 → XP_006821942.1  musashi homolog 2

    Related
    XP_006821942.1, XM_006821879.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 335
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  4. XM_006821878.1 → XP_006821941.1  musashi homolog 2

    Related
    XP_006821941.1, XM_006821878.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 335
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  5. XM_006821866.1 → XP_006821929.1  musashi homolog 2

    Related
    XP_006821929.1, XM_006821866.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  6. XM_006821864.1 → XP_006821927.1  musashi homolog 2

    Related
    XP_006821927.1, XM_006821864.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  7. XM_006821871.1 → XP_006821934.1  musashi homolog 2

    Related
    XP_006821934.1, XM_006821871.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  8. XM_006821867.1 → XP_006821930.1  musashi homolog 2

    Related
    XP_006821930.1, XM_006821867.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  9. XM_006821865.1 → XP_006821928.1  musashi homolog 2

    Related
    XP_006821928.1, XM_006821865.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  10. XM_006821873.1 → XP_006821936.1  musashi homolog 2

    Related
    XP_006821936.1, XM_006821873.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  11. XM_006821872.1 → XP_006821935.1  musashi homolog 2

    Related
    XP_006821935.1, XM_006821872.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  12. XM_006821876.1 → XP_006821939.1  musashi homolog 2

    Related
    XP_006821939.1, XM_006821876.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 345
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  13. XM_006821868.1 → XP_006821931.1  musashi homolog 2

    Related
    XP_006821931.1, XM_006821868.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  14. XM_006821883.1 → XP_006821946.1  musashi homolog 2

    Related
    XP_006821946.1, XM_006821883.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 309
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  15. XM_006821881.1 → XP_006821944.1  musashi homolog 2

    Related
    XP_006821944.1, XM_006821881.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 310
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  16. XM_006821882.1 → XP_006821945.1  musashi homolog 2

    Related
    XP_006821945.1, XM_006821882.1
    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  17. XM_006821877.1 → XP_006821940.1  musashi homolog 2

    Related
    XP_006821940.1, XM_006821877.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  18. XM_006821870.1 → XP_006821933.1  musashi homolog 2

    Related
    XP_006821933.1, XM_006821870.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 318
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  19. XM_006821869.1 → XP_006821932.1  musashi homolog 2

    Related
    XP_006821932.1, XM_006821869.1
    Conserved Domains (2) summary
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  20. XM_006821880.1 → XP_006821943.1  musashi homolog 2

    Related
    XP_006821943.1, XM_006821880.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 323
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:23 → 97
    RRM1_MSI; RNA recognition motif 1 in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins
Nucleotide Protein
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