tll tailless [Saccoglossus kowalevskii] - Gene

Summary

Gene symbol: tll
Gene description: tailless
See related: EnsemblRapid:GeneID_100302726
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Saccoglossus kowalevskii
Lineage: Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
Also known as: NR2E1
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: Un

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
101	current	Skow_1.1 (GCF_000003605.2)	Unplaced Scaffold	NW_003158254.1 (2079..8582, complement)

NW_003158254.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NW_003158254 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in anatomical structure development	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cell differentiation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: tailless

Names: nuclear receptor subfamily 2, group E, member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001164890.1 → NP_001158362.1 tailless

See identical proteins and their annotated locations for NP_001158362.1

Status: PROVISIONAL

Source sequence(s)

AY313155

UniProtKB/TrEMBL

Q7YTB9

Related

NP_001158362.1, NM_001164890.1

Conserved Domains (2) summary

cd06950
Location:147 → 345

NR_LBD_Tlx_PNR_like; The ligand binding domain of Tailless-like proteins, orphan nuclear receptors

cd07163
Location:8 → 99

NR_DBD_TLX; DNA-binding domain of Tailless (TLX) is composed of two C4-type zinc fingers