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fst follistatin [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 100301646, updated on 14-Dec-2023

Summary

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Gene symbol
fst
Gene description
follistatin
See related
Ensembl:ENSOMYG00000031771
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See fst in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 6 NC_048570.1 (3463669..3491741)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 6 NC_035082.1 (2305673..2318243)

Chromosome 6 - NC_048570.1Genomic Context describing neighboring genes Neighboring gene protein mono-ADP-ribosyltransferase PARP8 Neighboring gene ISL LIM homeobox 1 Neighboring gene proline-rich extensin-like protein EPR1 Neighboring gene heat shock protein, alpha-crystallin-related, b3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Temporal mRNA expression of transforming growth factor-beta superfamily members and inhibitors in the developing rainbow trout ovary. Lankford SE, et al. Gen Comp Endocrinol, 2010 Apr 1. PMID 19781545
  2. Overexpression of follistatin in trout stimulates increased muscling. Medeiros EF, et al. Am J Physiol Regul Integr Comp Physiol, 2009 Jul. PMID 19474387
  3. Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. Salem M, et al. BMC Genomics, 2010 Oct 13. PMID 20942956, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables activin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of activin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
follistatin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001160483.1 → NP_001153955.1  follistatin precursor

    See identical proteins and their annotated locations for NP_001153955.1

    Status: PROVISIONAL

    Source sequence(s)
    FJ185129
    UniProtKB/TrEMBL
    A0A8C7SPK9, B6UQB8
    Related
    ENSOMYP00000068531.2, ENSOMYT00000074664.2
    Conserved Domains (4) summary
    smart00280
    Location:195 → 242
    KAZAL; Kazal type serine protease inhibitors
    cd00104
    Location:286 → 319
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    pfam07915
    Location:33 → 89
    PRKCSH; Glucosidase II beta subunit-like protein
    cl00097
    Location:98 → 169
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048570.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    3463669..3491741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036979142.1 → XP_036835037.1  follistatin isoform X5

    UniProtKB/TrEMBL
    D1G5I4
    Conserved Domains (3) summary
    smart00280
    Location:143 → 190
    KAZAL; Kazal type serine protease inhibitors
    cd00104
    Location:234 → 267
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cl00097
    Location:46 → 117
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  2. XM_036979139.1 → XP_036835034.1  follistatin isoform X2

    UniProtKB/TrEMBL
    A0A8C7SPK9
    Conserved Domains (3) summary
    smart00274
    Location:170 → 193
    FOLN; Follistatin-N-terminal domain-like
    cd00104
    Location:199 → 242
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cl00097
    Location:98 → 169
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  3. XM_036979140.1 → XP_036835035.1  follistatin isoform X3

    UniProtKB/TrEMBL
    A0A8C7SPK9
    Conserved Domains (3) summary
    smart00274
    Location:170 → 193
    FOLN; Follistatin-N-terminal domain-like
    cd00104
    Location:199 → 242
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cl00097
    Location:98 → 169
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  4. XM_021604949.2 → XP_021460624.1  follistatin isoform X1

    UniProtKB/TrEMBL
    A0A8C7SR92, D1G5I4
    Related
    ENSOMYP00000068506.1, ENSOMYT00000074637.2
    Conserved Domains (4) summary
    smart00274
    Location:170 → 193
    FOLN; Follistatin-N-terminal domain-like
    smart00280
    Location:195 → 242
    KAZAL; Kazal type serine protease inhibitors
    cd00104
    Location:286 → 319
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cl00097
    Location:98 → 169
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  5. XM_036979141.1 → XP_036835036.1  follistatin isoform X4

    UniProtKB/TrEMBL
    A0A8C7SPK9
    Conserved Domains (3) summary
    smart00274
    Location:170 → 193
    FOLN; Follistatin-N-terminal domain-like
    cd00104
    Location:199 → 242
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cl00097
    Location:98 → 169
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
Nucleotide Protein
Heading Accession and Version

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