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CLEC2B C-type lectin domain family 2, member B [ Bos taurus (cattle) ]

Gene ID: 100297496, updated on 16-Jan-2024

Summary

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Gene symbol
CLEC2B
Gene description
C-type lectin domain family 2, member B
See related
Ensembl:ENSBTAG00000055140
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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See CLEC2B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (100068445..100089183)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 2 member B-like Neighboring gene C-type lectin domain family 2 member A Neighboring gene killer cell lectin like receptor F2 Neighboring gene LINE-1 retrotransposable element ORF2 protein Neighboring gene microRNA mir-12002a Neighboring gene C-type lectin domain family 2 member D11-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 2 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    100068445..100089183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024992652.2 → XP_024848420.1  C-type lectin domain family 2 member B isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MHL8, A0A3Q1NBN7
    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_015471291.3 → XP_015326777.1  C-type lectin domain family 2 member B isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MHL8, A0A3Q1NBN7
    Related
    ENSBTAP00000074074.2, ENSBTAT00000067281.2
    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_024992651.2 → XP_024848419.1  C-type lectin domain family 2 member B isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MHL8, A0A3Q1NBN7
    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  4. XM_015471293.3 → XP_015326779.1  C-type lectin domain family 2 member B isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MIE2, A0A3Q1NBN7
    Conserved Domains (1) summary
    cd03593
    Location:34 → 145
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein Strain
Heading Accession and Version

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